Article Text
Abstract
Background BRCA1/2 mutations have been shown to be associated with the development of many solid tumors including endometrial cancer (EC). The objectives of this study are to analyze the association between BRCA1/2 mutational status and clinicopathological characteristics as well as outcomes in EC patients.
Methods 510 eligible EC patients from the Cancer Genome Atlas database were included in the study. The association between clinicopathological characteristics and different BRCA1/2 mutational status was compared and analyzed. Analyses of the impact of BRCA mutations on survival in EC patients was conducted using Kaplan-Meier survival analyses and Cox regressions. In order to control confounding bias between groups, propensity score matching method was used.
Results Among the eligible patients, 11 (2.2%) harbored BRCA1 mutation, 43 (8.4%) harbored BRCA2 mutation, and 36 (7.1%) harbored both. Body mass index, rates of hypertension history, proportion of non-endometrioid histology and rates of positive peritoneal cytology were lower in patients with BRCA1/2 mutations compared with the group of wild-type counterpart (p = 0.020, 0.048, 0.001 and 0.012, respectively). Patients with BRCA1/2 mutations showed longer overall (OS) and recurrence-free survival (RFS) (in Kaplan-Meier analyses, p < 0.001 and p = 0.004, respectively; in Cox regressions, p = 0.001 and 0.007, respectively). Further analyses showed that the impact of BRCA mutations on survival was significant only in patients with high-grade endometrioid EC. Based on the cohorts generated after propensity score matching, in high-grade endometrioid EC patients, the influence of BRCA1/2 mutations remained significant on OS, but not on RFS (p = 0.003 and 0.057 in Kaplan-Meier analyses, p = 0.020 and 0.071 in Cox regressions).
Conclusion BRCA1/2 mutations are associated with better survival in patients with high grade endometrioid EC, indicating the value of BRCA testing in EC clinical management.
- Endometrial cancer
- BRCA1/2
- Mutations
- Survival
- Recurrence
This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
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1 Introduction
Endometrial cancer (EC) is one of the most common gynecological cancers both in China and in western countries,1–3 causing increasingly higher health-economic burdens. During the past decades, efforts have been made in prognostic prediction of EC. Dr. Bohkman, in 1983, proposed a dualistic classification model of EC based on patients’ pathological and metabolic features,4 which, however, was later on found to be still limited in accuracy.5 Recently, genomic studies have provided new insights into better understanding of tumor development, leading to more reliable survival prediction and the possibility of designing new treatment strategies. In 2013, the Cancer Genome Atlas (TCGA) research network proposed molecular classifications of EC based on multi-omics data.6 Since then, many researchers tried to establish simplified EC prognostic model for better clinical feasibility, exemplified by the Proactive Molecular Risk Classifier for Endometrial Cancer (ProMisE) model,7 and the integrated molecular and clinicopathological risk profile based on the PORTEC trial data.8 And several key molecular changes were identified for their vital clinical significance, such as the mutations of POLE, TP53, CTNNB1, etc.6,9–11
Another gene, BRCA1/2, is now generally recognized by the gynecologic oncology community as a vital biomarker in ovarian cancer treatment for suggesting potential efficacy of poly ADP-ribose polymerase (PARP) inhibitors treatment,12 and germline mutations of BRCA1/2 were proved to be associated with hereditary breast and ovarian cancer (HBOC) syndrome.13 Nevertheless, evidences regarding the role of BRCA1/2 in endometrial cancer were relatively limited. A recent study proved that loss-of-heterozygosity in EC patients with germline BRCA mutations was associated with unfavorable clinicopathological features,14 indicating the possible role of BRCA mutation in EC carcinogenesis. But until recently, most studies focused only on germline, instead of somatic, BRCA mutations, and detailed survival data of EC patients with BRCA mutations were still lacking.
Based on high throughput sequencing technology, TCGA is a pioneering project aiming at systemically revealing the genomic information of various cancer types, and also paving the way for further investigations about the association between genetic alterations and cancer survival outcome. Because of its open access to all qualified researchers, this database has become one of the most important sources for genomic study and has generated tremendous new data in the field of cancer research.
In this study, based on TCGA data, we compared the clinicopathological characteristics of patients with BRCA1/2 mutations and those with wild-type BRCA genes, and the survival influence of BRCA1/2 mutations were also analyzed.
2 Methods
2.1 Data sources and patient selection
In this study, genetic and clinicopathological data of patients from TCGA Uterine Corpus Endometrial Carcinoma (UCEC) project were downloaded from the UCSC-Xena15 and cBioPortal online platform.16,17 There were totally 548 patients in this cohort. 5 patients with colorectal cancer history and another 33 patients without genetic information were excluded. Finally, 510 eligible patients were included in this study for further analyses. The Institutional Review Board of Peking University People's Hospital considered the protocol for exemption from review since all data and analyses were based on deidentified patient information from a public database.
2.2 Term definitions
The definitions of all clinicopathological characteristics in this study were according to those described in the Common Data Element (CDE) Browser 5.3.5 (https://cdebrowser.nci.nih.gov). The stage of each case was determined based on the American Joint Committee on Cancer (AJCC) staging system, and the system version used was according to the time of making diagnosis. For tumor grade, G1, G2 and G3 were used to describe tumors with well, moderately, and poorly or undifferentiated cancer cells, respectively, which was in accordance with the FIGO grading system,18 and high-grade indicated tumors classified in G3 group. Tumors with serous and mixed serous and endometrioid histology were categorized as non-endometrioid type. In the study, data about BRCA1/2 somatic mutations were analyzed, which included the presence of all missense and truncating mutations. The patients were categorized into different subgroups according to BRCA1/2 mutational status.
2.3 Follow-up and outcome measures
The median follow-up time was 30.47 months (interquartile range: 17.43–52.76 months) for all eligible patients, 29.33 months (interquartile range: 17.07–49.47 months) for patients with wild-type BRCA genes, and 40.67 months (interquartile range: 22.88–72.55 months) for patients with BRCA mutations. Overall survival (OS) and recurrence-free survival (RFS), as two endpoints used in this study, were definited from the time of initial disease diagnosis to the time when death or disease recurrence occurred, respectively. Patients without any endpoint event were censored at their last follow-up in survival analyses.
2.4 Statistical analyses
In this study, χ2 test and Fisher's exact test were used for comparing categorical variables. To analyze the survival influence of BRCA mutation, Kaplan-Meier survival analyses (log rank test) and univariate Cox proportional hazard models were used. Patient stratifications were performed according to the clinicopathological features and further survival analyses were conducted based on certain patient subgroups. In order to control possible confounding bias caused by differences in baseline characteristics, propensity score matching (PSM) was conducted. In the PSM analysis of high-grade endometrioid EC cohort, matching variables included body mass index (BMI) and hypertension history, with clipper width being 0.02 and matching ratio being 1:1. Kaplan-Meier survival analyses and Cox regressions based on balanced cohorts after PSM were conducted. In all Cox regression models, the proportional hazard hypothesis was verified using time-dependent covariate method. All statistical analyses were performed with Statistics Package for the Social Sciences (SPSS) software (version 22.0; IBM Corporation, Armonk, NY, USA). All p values used in the study were two-sided and p < 0.05 was considered statistically significant.
3 Results
Among 510 eligible patients, a total of 90 (17.6%) had BRCA1/2 mutations, with 11 (2.2%) harboring BRCA1 mutation, 43 (8.4%) harboring BRCA2 mutation, and 36 (7.1%) harboring both. Compared with patients with wild-type BRCA genes, the patient group with BRCA1/2 mutations as a whole had lower BMI (p = 0.020), fewer cases with hypertension history (p = 0.048), more tumors with endometrioid histology (p = 0.001), and lower rates of positive peritoneal cytology (p = 0.012) (Table 1). In the group with BRCA1 mutations, more advanced age patients (p = 0.040), patients with higher BMI (p = 0.025) and higher frequency of residual disease after primary surgery (p = 0.024) were observed, compared with patients with BRCA2 or both gene mutations. Besides, significant statistic differences were also observed among the 3 groups regarding tumor grade and rates of lymph node metastasis (p < 0.001 and p = 0.017, respectively), as more patients with low-grade tumors and lower rates of lymph node metastasis were noted in the group with BRCA2 mutations (Table 2).
In Kaplan-Meier survival analyses, BRCA wild-type group showed significantly shorter OS and RFS compared with the group with BRCA mutations (p < 0.001 and p = 0.004, respectively) (Fig. 1). The results were further validated by Cox proportional hazard models (p = 0.001 for OS and p = 0.007 for RFS) (Table S1). When patients were classified according to stage, grade and histology, there were remained statistical significance in the impact of BRCA mutations on OS and RFS in patients with high grade tumors or endometrioid type (in high-grade cohort, p = 0.001 and 0.006 for OS and RFS; in endometrioid EC cohort, p = 0.012 and 0.036 for OS and RFS), while in low-grade or non-endometrioid EC patients, BRCA mutation could not bring additional survival benefits (Table S1).
Cross-classification of EC patients by grade and histology was conducted. Both Kaplan-Meier survival analyses and Cox regressions showed that the survival influence of BRCA mutations were only significant in high-grade endometrioid EC patients (p = 0.001 and 0.012 for OS and RFS in Kaplan-Meier analyses, p = 0.010 and 0.018 for OS and RFS in Cox regressions) (Table 3 and Fig. 2). In order to further validate the results and minimize the confounding, PSM was conducted in high-grade endometrioid EC patients, and two groups with comparable baseline clinicopathological characteristics were generated (Table S2). In the cohorts after PSM, BRCA mutations still significantly influenced patients’ OS (p = 0.003 in Kaplan-Meier analysis), with BRCA mutant group showing better survival outcome, while the difference in RFS between the two groups was not significant (p = 0.057 in Kaplan-Meier analysis) (Fig. 2). This result was also validated by Cox regressions after PSM (for OS, hazard ratio [HR] = 0.082, 95% confidence interval [CI] 0.010–0.676, p = 0.020; for RFS, HR = 0.303, 95% CI 0.083–1.106, p = 0.071) (data not shown in tables and figures).
4 Discussion
In recent years, researches designed to better understand the significance of BRCA mutations are changing clinical practice, especially in the domain of ovarian cancer treatment. There were success in several key clinical trials, including SOLO-119, PAOLA,20 PRIMA,21 etc., which facilitated the National Comprehensive Cancer Network (NCCN) recommendation of PARP inhibitors as first-line maintenance therapy in epithelial ovarian cancer, and also urged the delivery of BRCA testing as a common practice.22 In EC, however, we have limited understanding of BRCA mutational status since few research evidences supporting related clinical applications. In this study, we have proved the role of BRCA mutations in predicting EC patients’ survival. Our results demonstrate that high-grade endometrioid EC patients with BRCA1/2 mutations have longer survival than those with wild-type BRCA, though the time to recurrence is not significantly affected.
Previous work suggested that patients with germline BRCA1 mutations were linked to an increased risk of developing serous or serous-like EC.23 A recent study carried out by de Jonge et al.14 further proved that ECs developed in the context of germline BRCA mutation and subsequent loss-of-heterozygosity were more commonly of non-endometrioid type. Our study, however, showed that in EC cohort with BRCA1/2 somatic mutations, there were significantly more endometrioid cases (88.9% vs. 72.4%, p = 0.001). In addition, the distribution of histological types was similar among patients with BRCA1, BRCA2 or both mutations (p = 0.181). These results suggested the possible differences in tumorigenesis-related mechanisms after germline or somatic BRCA mutations. Besides, based on the study results of de Jonge et al.,14 ECs with germline BRCA mutation and loss-of-heterozygosity showed more adverse prognostic factors compared with those without loss-of-heterozygosity, indicating unfavorable survival. But in another recent study by Kadan et al.,24 serous ECs with BRCA mutations showed similar survival with BRCA wild-type ones, which was in accordance with our data (p = 0.115 and 0.226 for OS and RFS in non-endometrioid EC).
According to previous studies, BRCA1/2 mutations were associated with homologous recombination defects and increased mutation burden in the genome.25 And higher tumor mutation burden was proved to be associated with better survival outcome in multiple cancer types from direct and indirect evidences.6,26–28 These results might partly explain why high-grade endometrioid EC patients with BRCA mutations exhibited better survival than BRCA wild-type ones. While for non-endometrioid type EC, more invasive biological behavior endowed it generally poor survival compared with endometrioid ones, in which context, the positive survival impact of BRCA mutation might be not prominent enough to show a statistically significant effect. But still, more studies were needed to validate the above proposed mechanism.
In our study, detailed clinicopathological features of patients with distinct BRCA mutational status were compared, and stratification of patients according to clinicopathological features was performed. But there were also several limitations. Firstly, as a retrospective study, the capacity of controlling inter-group confounders was limited, though statistical method, such as PSM, was used. Besides, though the rates of receiving radio-, chemo- and molecular targeted therapies were basically comparable between the groups, detailed information about adjuvant therapy use was lacking in TCGA database. Secondly, in the study, since the number of patients with BRCA1 mutations was limited, we did not manage to compare the survival influence of BRCA1 and BRCA2 mutations and discuss their roles separately. Larger cohorts may be helpful for more detailed comparison and better robustness of the results. Thirdly, since germline and somatic BRCA mutations may be distinct in their prognostic roles, it is better to set another cohort of germline BRCA mutant patients for further comparisons, which was not achieved in our study.
Currently, the trend toward individualized tumor management based on both clinicopathological features and molecular profiles is coming to the mainstream of clinical practice in gynecologic oncology treatment, and gene testing is getting increasing impact in revealing certain prognostic features and suggesting specific treatment modalities. One example is the currently ongoing PORTEC-4a trial, which combined EC patients’ molecular and clinicopathological features in the clinical-decision system for choosing radiation therapy mode.29 Our results about BRCA mutation provide another promising biomarker for prognostic prediction in the subgroup of high-grade endometrioid EC patients, and might be helpful for future molecular profile based immuno- and targeted therapy strategy planning. Nonetheless, further studies are needed in the future to fully validate the clinical significance of different BRCA mutation types, and more genetic researches might be helpful for better understanding the underlying mechanisms so as to better guide clinical practice.
Funding
This work was supported by the National Natural Science Foundation of China (81972426 and 81874108), Special Projects for Strengthening Basic Research of Peking University (BMU2018JC005), National Key Technology R&D Program of China (2019YFC1005200 and 2019YFC1005201).
Declaration of competing interest
No conflict of interest was reported from the authors.
Acknowledgements
The results of this study are based upon data generated by the TCGA Research Network: https://www.cancer.gov/tcga.